VKM genetic data with Bacterial sequences


IDVKM culture* GenusSpeciesSequenced culture*Seq_type GenBank Nobp
2358 B-700 Sporosarcina sp. VKM B-700 16S rRNA gene KX028861 1509
395 B-711 Bacillus safensis VKM B-711 gyrB gene KX011111 1158
394 B-732 Weizmannia coagulans VKM B-732 gyrB gene KX028866 756
2357 B-760 Bacillus licheniformis VKM B-760 16S rRNA gene KX028865 1483
2767 B-760 Bacillus licheniformis VKM B-760 gyrB gene KX028867 537
2416 B-762 Bacillus inaquosorum VKM B-762 16S rRNA gene HQ605916 1466
417 B-762 Bacillus inaquosorum VKM B-762 gyrB gene HQ605915 1063
2517 B-876 Pseudomonas chlororaphis VKM B-816T 16S rRNA gene AY271791 1479
460 B-879 Acetobacter aceti VKM B-879 5S rRNA gene M76578 120
2457 B-975 Pseudomonas stutzeri VKM B-975 16S rRNA gene EU883663 1495
461 B-1227 Gluconobacter sp. VKM B-1227 5S rRNA gene M76579 120
160 B-1335 Angulomicrobium tetraedrale VKM B-1335 mxaF gene DQ652142 498
2537 B-1336 Angulomicrobium tetraedrale VKM-B1336 16S rRNA gene AJ542534 1409
1504 B-1378 Desulfomicrobium baculatum DSM 4028T 16S rRNA gene AJ277894 1517
2538 B-1479 Labrys monachus VKM B-1479 16S rRNA gene AJ535707 1442
147 B-1518 Alcaligenes faecalis VKM B-1518 pac gene FJ042491 2451
2516 B-1524 Pseudomonas brassicacearum VKM B-1524 16S rRNA gene AY271792 1493
1533 B-1598 Desulfomicrobium macestii DSM 4194T 16S rRNA gene AJ237604 1503
2578 B-1606 Methylopila capsulata IM1 16S rRNA gene AF004844 1399
383 B-1606 Methylopila capsulata IM1 fhcD gene AY920582 761
2420 B-1607 Methylophilus sp. B 16S rRNA gene HM001269 1387
168 B-1607 Methylophilus sp. B mxaF gene HM001270 516
2493 B-1610 Methylobacillus flagellatus KT 16S rRNA gene DQ287787 1400
157 B-1623 Methylophilus methylotrophus VKM B-1623 mxaF gene FJ904267 508
835 B-1627 Desulfosarcina variabilis 16S rRNA gene M34407 1527
599 B-1628 Desulfosporosinus orientis DSM 765T 16S rRNA gene Y11570 1511
834 B-1629 Methanobacterium bryantii DSM 863 16S rRNA gene M59124 1480
1682 B-1634 Methanobacterium ivanovii OCM 140 16S rRNA gene AF095261 1417
1536 B-1635 Methanosarcina barkeri DSM 800T 16S rRNA gene AJ012094 1411
1535 B-1636 Methanosarcina mazei DSM 2053T 16S rRNA gene AJ012095 1333
2256 B-1733 Halorubrum distributum VKM B-1733 16S rRNA gene L26170 181
464 B-1733 Halorubrum distributum VKM B-1733 5S rRNA gene L27343 119
2293 B-1734 Haloterrigena turkmenica VKM B-1734 16S rRNA gene NR040778 1473
2583 B-1739 Halorubrum terrestre VKM B-1739 16S rRNA gene AB090169 1467
465 B-1739 Halorubrum terrestre VKM B-1733 5S rRNA gene L27343 119
2438 B-1745 Methylovorus glucosotrophus DSM6874T 16S rRNA gene FR733702 1534
2278 B-1757 Desulfovibrio africanus DSM 2603T 16S rRNA gene X99236 1510
2509 B-1758 Desulfovibrio carbinolicus DSM 3852 16S rRNA gene AY626035 1510
2502 B-1759 Desulfovibrio gigas DSM 1382, ATCC 19364 16S rRNA gene AY726757 1510
2557 B-1760 Desulfovibrio vulgaris DSM 644T 16S rRNA gene AF418179 1511
2574 B-1761 Desulfovibrio alcoholivorans DSM 5433T 16S rRNA gene AF053751 1524
344 B-1763 Desulfovibrio salexigens DSM 2638T complete genome CP001649 4289847
581 B-1764 Desulfovibrio sulfodismutans ThAcO1 16S rRNA gene Y17764 1479
2561 B-1767 Thermodesulfobacterium commune DSM 2178T 16S rRNA gene AF418169 1497
2483 B-1774 Clostridium pasteurianum DSM 525T 16S rRNA gene DQ911268 320
369 B-1774 Clostridium pasteurianum DSM 525 = ATCC 6013 complete genome CP009268 4352101
2321 B-1775 Eubacterium barkeri ATCC 25849 16S rRNA gene M23927 1527
2279 B-1786 Methanothermobacter thermophilus VKM B-1786, DSM 6529 16S rRNA gene X99048 1432
376 B-1787 Clostridium acetobutylicum ATCC 824 complete genome AE001437 3940880
2320 B-1799 Desulfovibrio desulfuricans ATCC 27774 16S rRNA gene M34113 1551
317 B-1801 Desulfovibrio fructosivorans JJ draft genome AECZ00000000 4673595
2319 B-1803 Desulfobotulus sapovorans 1pa3 16S rRNA gene M34402 1398
2288 B-1804 Desulfomicrobium apsheronum DSM 5918T 16S rRNA gene U64865 1473
2277 B-1805 Desulfotomaculum kuznetsovii DSM 6115T 16S rRNA gene Y11569 1577
2328 B-1834 Thermoanaerobacter thermohydrosulfuricus E100-69 16S rRNA gene L09161 1768
2327 B-1835 Thermoanaerobacter ethanolicus ATCC 31550 16S rRNA gene L09162 1740
2520 B-1908 Methanothermobacter thermautotrophicus delta H 16S rRNA gene AY196660 1265
467 B-1954 Haloferax sp. VKM B-1954 5S rRNA gene L27165 122
463 B-1954 Haloferax sp. VKM B-1954 5S rRNA gene L27166 122
2558 B-1955 Desulfobacterium autotrophicum DSM 3382T 16S rRNA gene AF418177 1523
374 B-1955 Desulfobacterium autotrophicum HRM2 chromosome CP001087 5589073
98 B-1955 Desulfobacterium autotrophicum HRM2 plasmid pHRM2a CP001088 68709
1215 B-1956 Desulfobulbus propionicus DSM 2032T 16S rRNA gene AY548789 1533
343 B-1956 Desulfobulbus propionicus DSM 2032T complete genome CP002364 3851869
2569 B-1957 Methanobacterium formicicum DSM 1535T 16S rRNA gene AF169245 1376
2428 B-1959 Methanobacterium thermoautotrophicus DSM 3266T 16S rRNA gene HE654005 1391
2281 B-1962 Methanothermobacter defluvii VKM B-1962, DSM 7466 16S rRNA gene X99046 1445
2280 B-1963 Methanothermobacter thermoflexus VKM B-1963, DSM 7268 16S rRNA gene X99047 1454
2276 B-2003 Desulfosporosinus hippei DSM 8344T 16S rRNA gene Y11571 1492
2581 B-2013 Methylophilus leisingerii DSM 6813T 16S rRNA gene AB193725 1502
384 B-2114 Methylocystis rosea 72 fhcD gene AY920594 775
149 B-2115 Methylobacter marinus INMI 90, UNIQEM 21 nifH gene AF484675 417
2323 B-2124 Methylosinus trichosporium isolate="42" 16S rRNA gene L20844 1228
382 B-2124 Methylosinus trichosporium VKM B-2124 fhcD gene DQ153063 768
2325 B-2127 Methylosinus sporium 14 16S rRNA gene L20803 1068
2543 B-2128 Methylocystis echinoides IMET 10491 16S rRNA gene AJ458473 1407
123 B-2128 Methylocystis echinoides IMET 10491 nifD gene AJ608699 1103
892 B-2133 Methylomicrobium alcaliphilum 20Z 16S rRNA gene EF495157 1395
309 B-2133 Methylomicrobium alcaliphilum 20Z complete genome FO082060 4668296
14 B-2133 Methylomicrobium alcaliphilum 20Z tmRNA gene HG525417 375
2270 B-2147 Thermohydrogenium kirishiense DSM 11055T, clone 1 16S rRNA gene FR749963 1579
2271 B-2147 Thermohydrogenium kirishiense DSM 11055T 16S rRNA gene FR749964 1506
2272 B-2147 Thermohydrogenium kirishiense DSM 11055T 16S rRNA gene FR749965 1508
2576 B-2159 Paracoccus methylarcula VKM B-2159 16S rRNA gene AF030436 1455
2572 B-2192 Desulfotomaculum alkaliphilum S1 16S rRNA gene AF097024 1502
2551 B-2193 Anoxybacillus pushchinoensis k-1 16S rRNA gene AJ010478 1338
3875 B-2198 Methanobacterium congolense MH 16S rRNA gene KU991820 1260
2451 B-2200 Desulfovibrio sp. VKM B-2200 16S rRNA gene FJ606758 1429
2450 B-2201 Clostridium sp. VKM B-2201 16S rRNA gene FJ606759 1151
2453 B-2202 Clostridium sp. VKM B-2202 16S rRNA gene FJ606756 1435
2512 B-2221 Methylovorus mays C 16S rRNA gene AY486132 1440
2568 B-2222 Paracoccus kondratievae GB (T) 16S rRNA gene AF250332 1360
314 B-2223 Methylobacterium extorquens CM4 chromosome CP001298 5777908
100 B-2223 Methylobacterium extorquens CM4 plasmid CP001299 380207
99 B-2223 Methylobacterium extorquens CM4 plasmid CP001300 22617
2439 B-2236 Albibacter methylovorans DSM22840T 16S rRNA gene FR733694 1476
2594 B-2238 Methylobacterium suomiense NCIMB 13778 16S rRNA gene AB175645 1433
2595 B-2239 Methylobacterium rhodesianum NCIMB 13779 16S rRNA gene AB175635 1435
2565 B-2245 Methylomicrobium buryatense 5B 16S rRNA gene AF307138 1500
2591 B-2251 Methylophaga alcalica M39 16S rRNA gene AF384373 1494
2562 B-2253 Xanthobacter viscosus 7d 16S rRNA gene AF399970 1384
2555 B-2268 Methanosarcina lacustris ZS 16S rRNA gene AF432127 1381
2554 B-2270 Psychrobacter muriicola 2pS 16S rRNA gene AF517755 1478
2522 B-2271 Clostridium algoriphilum 14D1 16S rRNA gene AY117755 1481
2545 B-2274 Oceanithermus profundus DSM 14977T 16S rRNA gene AJ430586 1498
2452 B-2279 Clostridium lituseburense VKM B-2279 16S rRNA gene FJ606757 1407
2511 B-2281 Thermosinus carboxydivorans Nor1 16S rRNA gene AY519200 936
371 B-2281 Thermosinus carboxydivorans Nor1 draft genome AAWL00000000 2889774
2526 B-2282 Carboxydocella thermautotrophica 41 16S rRNA gene AY061974 1455
2510 B-2283 Thermincola carboxydiphila 2204 16S rRNA gene AY603000 1482
2544 B-2286 Caldithrix abyssi DSM 13497T 16S rRNA gene AJ430587 1504
2539 B-2292 Vulcanithermus mediatlanticus DSM 14978T 16S rRNA gene AJ507298 1481
2505 B-2303 Methylophaga muralis Kr3 16S rRNA gene AY694421 1419
2515 B-2308 Alkalibacter saccharofermentans Z-79820 16S rRNA gene AY312403 1465
2518 B-2316 Desulfurococcus fermentans Z-1312 16S rRNA gene AY264344 1395
373 B-2316 Desulfurococcus fermentans DSM 16532 complete genome CP003321 1384116
2498 B-2319 Desulfotomaculum nigrificans CO-1-SRB 16S rRNA gene AY961415 1424
370 B-2319 Desulfotomaculum nigrificans CO-1-SRB complete genome CP002736 2892255
2527 B-2320 Halonatronum saccharophilum Z-7986 16S rRNA gene AY014858 1414
2497 B-2326 Halomonas kenyensis AIR-2 16S rRNA gene AY962237 1371
2590 B-2327 Anoxynatronum sibiricum Z-7981 16S rRNA gene AF522323 1409
2503 B-2329 Desulfonatronum cooperativum Z-7999 16S rRNA gene AY725424 1493
2489 B-2347 Hansschlegelia plantiphila S1 16S rRNA gene DQ404188 1394
2508 B-2348 Tepidimicrobium ferriphilum SB91 16S rRNA gene AY656718 1493
2499 B-2349 Clostridium alkalicellulosi Z-7026 16S rRNA gene AY959944 1489
2506 B-2358 Carboxydocella sporoproducens Kar 16S rRNA gene AY673988 1418
2456 B-2360 Psychrobacter maritimus 3ps 16S rRNA gene FJ039851 1463
2530 B-2361 Rhodoblastus sphagnicola DSM 16996T 16S rRNA gene AM040096 1418
2513 B-2363 Thermoanaerobacterium aciditolerans 761-119 16S rRNA gene AY350594 1442
2492 B-2367 Desulfovibrio arcticus B15 16S rRNA gene DQ296030 1425
2468 B-2368 Clostridium frigoriphilum 14F 16S rRNA gene EF570920 1388
2491 B-2369 Clostridium tagluense A121 16S rRNA gene DQ296031 1454
2553 B-2370 Methanosarcina mazei JL01 16S rRNA gene AF519802 1370
2486 B-2371 Methanobacterium arcticum M2 16S rRNA gene DQ517520 1434
70 B-2377 Psychrobacter arcticus 273-4 16S rRNA gene AY444822 1504
372 B-2377 Psychrobacter arcticus 273-4 complete genome CP000082 2650701
2507 B-2378 Psychrobacter cryohalolentis K5 16S rRNA gene AY660685 1500
421 B-2384 Desulfohalobium utahense EtOH3 dsrA and dsrB genes DQ386236 1955
2287 B-2392 Carboxydothermus ferrireducens JW/AS-Y7 16S rRNA gene U76363 1503
2531 B-2393 Thiorhodococcus mannitoliphagus WST 16S rRNA gene AJ971090 1404
2458 B-2402 Natronincola ferrireducens Z-0511 16S rRNA gene EU878275 1602
2485 B-2403 Anaerobacillus alkalilacustris Z-0521 16S rRNA gene DQ675454 1516
148 B-2403 Anaerobacillus alkalilacustris Z-0521 nifH gene EU861990 449
2478 B-2408 Caldanaerobacter uzonensis K67 16S rRNA gene EF195126 1417
2467 B-2413 Desulforococcus kamchatkensis 1221n 16S rRNA gene EU167539 1496
2482 B-2440 Methanobacterium veterum MK4 16S rRNA gene EF016285 1347
2487 B-2441 Methylophaga aminisulfidivorans MP 16S rRNA gene DQ463161 1498
2552 B-2443 Telmatospirillum siberiense 26-4b1 16S rRNA gene AF524863 1344
2496 B-2444 Telmatospirillum siberiense 26-2 16S rRNA gene DQ094181 1345
3872 B-2446 Mucilaginibacter paludis TPT56 16S rRNA gene AM490402 1406
2469 B-2461 Ammonifex thiophilus SR 16S rRNA gene EF554597 1536
2550 B-2464 Methylomicrobium kenyense AMO1T 16S rRNA gene AJ132384 1486
2514 B-2471 Acidilobus sacharovorans 345-15 16S rRNA gene AY350586 1451
2466 B-2475 Desulfonatronum lacustre Su2 16S rRNA gene EU315115 1524
3859 B-2476 Desulfonatronum lacustre Ki4 16S rRNA gene KC417373 1412
3870 B-2477 Desulfonatronum buryatense Ki5 16S rRNA gene GQ227729 1398
2528 B-2479 Ectothiorhodospira variabilis WN22T 16S rRNA gene AM943121 1401
2463 B-2484 Ancylobacter dichloromethanicus DM16 16S rRNA gene EU589386 1393
2464 B-2486 Stenotrophomonas chelatiphaga LPM-5 16S rRNA gene EU573216 1454
2461 B-2489 Rhodovulum steppense A-20s 16S rRNA gene EU741680 1349
2476 B-2502 Alkaliphilus peptidifermentas Z-7036 16S rRNA gene EF382660 1523
2475 B-2503 Natronincola peptidivorans Z-7031 16S rRNA gene EF382661 1448
2465 B-2510 Anoxynatronum buryatense Su22 16S rRNA gene EU315116 1507
2455 B-2511 Celerinatantimonas yamalonensis C7 16S rRNA gene FJ039852 1433
2598 B-2514 Thiospirochaeta perfilievii P 16S rRNA gene AY337318 1428
3866 B-2514 Thiospirochaeta perfilievii P chromosome CP035807 3667739
3881 B-2514 Thiospirochaeta perfilievii P plasmid CP035808 32844
2462 B-2519 Sphaerotilus montanus HS 16S rRNA gene EU636006 1407
459 B-2519 Sphaerotilus montanus HS cpn60 gene FJ167405 523
418 B-2519 Sphaerotilus montanus HS gyrB gene FJ161075 1190
2262 B-2520 Thiothrix caldifontis G1 16S rRNA gene EU642573 1404
456 B-2520 Thiothrix caldifontis G1 cpn60 gene FJ161077 527
396 B-2520 Thiothrix caldifontis G1 gyrB gene FJ032200 1123
2263 B-2521 Thiothrix lacustris BL 16S rRNA gene EU642572 1399
457 B-2521 Thiothrix lacustris BL cpn60 gene FJ161076 534
397 B-2521 Thiothrix lacustris BL gyrB gene FJ032199 1120
2454 B-2522 Geoglobus acetivorans SBH6 16S rRNA gene FJ216404 1417
2449 B-2527 Thalassospira permensis SMB34 16S rRNA gene FJ860275 1398
2446 B-2536 Caldithrix palaeochoryensis MC 16S rRNA gene FJ999729 1482
2419 B-2537 Ectothiorhodospira magna B7-7 16S rRNA gene HM149323 1471
2443 B-2543 Methyloferula stellata AR4 16S rRNA gene FR686343 1408
126 B-2543 Methyloferula stellata AR4 mmoX gene FR686346 1106
125 B-2543 Methyloferula stellata AR4 mxaF gene FR686349 537
122 B-2543 Methyloferula stellata AR4 nifH gene FR686351 434
118 B-2543 Methyloferula stellata AR4 rbcL gene FR686352 800
2448 B-2547 Methylophilus flavus Ship 16S rRNA gene FJ872108 1430
159 B-2547 Methylophilus flavus Ship mxaF gene FJ872110 513
2447 B-2548 Methylophilus luteus Mim 16S rRNA gene FJ872109 1418
158 B-2548 Methylophilus luteus Mim mxaF gene FJ872111 505
2459 B-2549 Fervidobacterium riparium 1445t 16S rRNA gene EU851047 1482
2488 B-2588 Methyloversatilis universalis FAM5 16S rRNA gene DQ442273 1391
2429 B-2590 Methylobacillus arboreus Iva 16S rRNA gene GU937479 1397
166 B-2590 Methylobacillus arboreus Iva mxaF gene HM030736 467
2430 B-2591 Methylobacillus gramineus Lap 16S rRNA gene GU937478 1406
167 B-2591 Methylobacillus gramineus Lap mxaF gene HM030735 453
2435 B-2603 Moorella humiferrea 64_FGQ 16S rRNA gene GQ872425 1488
2431 B-2609 Carboxydocella manganica SLM61 16S rRNA gene GU584133 1522
2326 B-2618 Thermoanaerobacter acetoethylicus ATCC 33265 16S rRNA gene L09163 1740
2548 B-2620 Clostridium stercorarium DSM 8532T 16S rRNA gene AJ310082 1500
298 B-2621 Thermotoga neapolitana DSM 4359T complete genome CP000916 1884562
345 B-2622 Pyrococcus furiosus DSM 3638T complete genome AE009950 1908256
333 B-2627 Thermoanaerobacterium thermosaccharolyticum DSM 571T complete genome CP002171 2785752
286 B-2644 Methyloversatilis discipulorum RZ18-153 draft genome ARVV00000000 4251015
2407 B-2646 Methylopila musalis MUSA 16S rRNA gene JQ173144 1307
2444 B-2660 Erythrobacter sp. BF8 16S rRNA gene FN668376 1467
2529 B-2661 Rhodobacter sp. BF9 16S rRNA gene AM691096 1454
2588 B-2662 Rhodomicrobium vannielii BF14 16S rRNA gene AM691111 1470
2418 B-2663 Methylovorus menthalis MM 16S rRNA gene HQ380796 1415
165 B-2663 Methylovorus menthalis MM mxaF gene HQ380797 516
2268 B-2666 Natranaerobaculum magadiensis Z-1001 16S rRNA gene HQ322119 1498
2269 B-2666 Natranaerobaculum magadiensis Z-1001 16S rRNA gene HQ322120 1498
2267 B-2666 Natranaerobaculum magadiensis Z-1001 16S rRNA gene HQ322118 1499
2415 B-2667 Fuchsiella alkaliacetigena Z-7100 16S rRNA gene HQ828140 1491
2405 B-2668 Melioribacter roseus P3M-2 16S rRNA gene JQ292917 1539
368 B-2668 Melioribacter roseus VKM B-2668 complete genome CP003557 3300414
2406 B-2669 Ornatilinea apprima P3M-1 16S rRNA gene JQ292916 1462
2414 B-2670 Caloribacterium cisternae SGL43 16S rRNA gene JF262044 1437
2394 B-2671 Tepidibacillus fermentans STGH 16S rRNA gene KC242245 1589
2411 B-2672 Deferrisoma camini S3R1 16S rRNA gene JF802205 1503
2412 B-2683 Thermosulfurimonas dismutans S95 16S rRNA gene JF346116 1532
2413 B-2684 Methylophaga lonarensis MPL 16S rRNA gene JF330773 1491
2417 B-2685 Brockia lithotrophica Kam1851 16S rRNA gene HQ540553 1458
2389 B-2692 Methyloversatilis thermotolerans 3t 16S rRNA gene KC782839 1415
367 B-2692 Methyloversatilis thermotolerans 3t draft genome ARCV00000000 4160809
2402 B-2706 Methyloligella halotolerans C2 16S rRNA gene JQ773443 1444
164 B-2706 Methyloligella halotolerans C2 mxaF gene JQ796869 528
2401 B-2707 Methyloligella solikamskensis SK12 16S rRNA gene JQ773444 1444
2373 B-2708 Rhodobaculum claviforme B7-4 16S rRNA gene KM077019 1436
2424 B-2722 Belliella buryatense 2C 16S rRNA gene HF913423 695
2585 B-2732 Clostridium hiranonis TO-931 16S rRNA gene AB023970 1393
2211 B-2733 Clostridium hylemonae TN-272 16S rRNA gene AB023973 1445
2566 B-2734 Clostridium scindens ATCC 35704 16S rRNA gene AF262238 1529
2542 B-2735 Clostridium frigoris DSM 14204 16S rRNA gene AJ506116 1477
2541 B-2736 Clostridium lacusfryxellens DSM 14205T 16S rRNA gene AJ506118 1418
2540 B-2737 Clostridium bowmanii DSM 14206T 16S rRNA gene AJ506119 1477
2549 B-2738 Clostridium psychrophilum A-1/C-an/I 16S rRNA gene AJ297443 1433
3868 B-2739 Clostridium estertheticum NCIBM 12511 16S rRNA gene S46734 1427
2408 B-2742 Sphaerochaeta associata GLS2 16S rRNA gene JN944166 1504
2409 B-2743 Coprobacter fastidiosus NSB1 16S rRNA gene JN703378 1490
458 B-2743 Coprobacter fastidiosus NSB1 cpn60 gene JQ340477 612
2395 B-2744 Desulfonatronum zhilinae Al915-01 16S rRNA gene JX984981 1523
2381 B-2746 Alkaliphilus namsaraevii X-07-2 16S rRNA gene KJ196388 1474
2383 B-2748 Methylopila turkensis Side1 16S rRNA gene KF728382 1368
2586 B-2752 Thermoanaerobacter pentosaceus DTU01 16S rRNA gene GU176611 1560
2404 B-2760 Dissulfuribacter thermophilus S69 16S rRNA gene JQ414031 1502
2390 B-2763 Proteinivorax tanatarense Z-810 16S rRNA gene KC702860 1435
2399 B-2764 Proteinivorax tanatarense Z-910 16S rRNA gene JQ904542 1488
2400 B-2764 Proteinivorax tanatarense Z-910 16S rRNA gene JQ904541 1488
2396 B-2765 Methanocalculus natronophilus Z-7105 16S rRNA gene JX966306 1417
2397 B-2766 Fuchsiella ferrireducens Z-7101 16S rRNA gene JX566887 1499
2571 B-2767 Thermoanaerobacter siderophilus SR4(T) 16S rRNA gene AF120479 1561
2286 B-2768 Moorella glycerini YS6 16S rRNA gene U82327 1513
2521 B-2769 Tepidibacter thalassicus SC 562 16S rRNA gene AY158079 1404
2284 B-2770 Cellulosilyticum lentocellum DSM 5427T 16S rRNA gene X71851 1508
360 B-2770 Cellulosilyticum lentocellum DSM 5427T complete genome CP002582 4714237
2523 B-2771 Thermococcus stetteri DSM 5262T 16S rRNA gene AY099186 1442
2524 B-2772 Thermococcus pacificus DSM 10394T 16S rRNA gene AY099182 1436
2525 B-2773 Thermococcus gorgonarius DSM 10395T 16S rRNA gene AY099177 1445
2589 B-2774 Thermococcus sibiricus MM 739 16S rRNA gene AJ238992 1305
2519 B-2777 Methanospirillum hungatei JF-1 16S rRNA gene AY196683 1255
2387 B-2782 Thermogutta hypogea SBP2 16S rRNA gene KC867695 1445
2292 B-2787 Paracoccus communis S3 16S rRNA gene NR133809 1428
2393 B-2788 Methylopila oligotropha 2395A from Russia 16S rRNA gene KC243676 1447
2392 B-2789 Ancylobacter defluvii SK15 from Russia 16S rRNA gene KC243678 1381
2372 B-2790 Fuchsiella ferrireducens Z-7102 16S rRNA gene KM215211 1499
2427 B-2801 Rhodovulum salis JA 746T 16S rRNA gene HE680093 1356
2437 B-2802 Thermotoga agilis 1864opik 16S rRNA gene GQ292554 1502
2614 B-2803 Thermosipho activus Rift-s3 16S rRNA gene KF931642 1519
2382 B-2804 Mobilitalea sibirica P3M-3 16S rRNA gene KF931641 1444
2388 B-2805 Thermogutta terrifontis R1 16S rRNA gene KC867694 1483
2423 B-2806 Methanosarcina porcellina Pr2 16S rRNA gene HG531806 1441
2421 B-2807 Methanosarcina porcellina Pr1 16S rRNA gene HG531808 1432
2425 B-2808 Methanospirillum stamsii DSM 26304T 16S rRNA gene HF569045 1408
2422 B-2809 Sphaerochaeta sp. DSM 26296 16S rRNA gene HG531807 1470
2283 B-2821 Spirochaeta asiatica Z-7591 16S rRNA gene X93926 1469
3865 B-2822 Thauera hydrothermalis Par-f-2T 16S rRNA gene MG874708 1357
3891 B-2822 Thauera hydrothermalis Par-f-2T complete genome CP028425 3127098
169 B-2824 Methanosarcina mazei TMA mcrA gene AB300778 737
2440 B-2826 Methanosarcina vacuolata DSM1232T 16S rRNA gene FR733661 1473
2291 B-2828 Carnobacterium funditum pf3 16S rRNA gene S86170 1521
2329 B-2829 Carnobacterium alterfunditum 16S rRNA gene L08623 1551
2374 B-2832 Tepidisphaera mucosa 2842 16S rRNA gene KM036168 1491
2547 B-2833 Psychrobacter glacincola DSM 12194T 16S rRNA gene AJ312213 1515
2289 B-2835 Psychrobacter immobilis ATCC 43116 16S rRNA gene U39399 1477
2536 B-2836 Psychrobacter vallis CMS 39 16S rRNA gene AJ584832 1481
2535 B-2837 Psychrobacter aquaticus CMS 56 16S rRNA gene AJ584833 1481
2534 B-2838 Psychrobacter maritimus Pi2-20T 16S rRNA gene AJ609272 1476
2534 B-2838 Psychrobacter maritimus Pi2-20T 16S rRNA gene AJ609272 1476
2432 B-2842 Natranaerobius jonesii JW/NM-KB 43 16S rRNA gene GU552436 1404
2580 B-2843 Methanospirillum lacunae Ki8-1 16S rRNA gene AB517986 1260
2386 B-2849 Methylobrevis pamukkalensis PK2 16S rRNA gene KF683074 1367
366 B-2849 Methylobrevis pamukkalensis PK2 draft genome MCRJ00000000 4380693
2385 B-2850 Advenella kashmirensis PK1 16S rRNA gene KF683075 1415
282 B-2853 Geobacillus icigianus G1w1 draft genome JPYA00000000 3457810
2363 B-2854 Dissulfurmicrobium hydrothermalis Sh68 16S rRNA gene KT159733 1521
2597 B-2855 Thermosulfuriphilus ammonigenes ST65 16S rRNA gene KY471008 1533
319 B-2856 Pyrobaculum ferrireducens 1860 complete genome CP003098 2467972
2378 B-2857 Coprobacter secundus 177 16S rRNA gene KJ572412 1290
2377 B-2859 Alistipes inops 627 16S rRNA gene KJ572413 1237
2376 B-2871 Tepidimicrobium ningboensis TH-1 16S rRNA gene KJ659943 1451
2375 B-2877 Desulfovibrio gilichinskyi K3S 16S rRNA gene KJ739728 1402
2367 B-2881 Thermostilla marina SVX8 16S rRNA gene KR872395 1490
3864 B-2882 Tepidibaculum saccharolyticum STR9 16S rRNA gene MH200617 1477
293 B-2888 Methyloversatilis discipulorum FAM1 draft genome AZUP00000000 4306529
339 B-2901 Ruthenibacterium lactatiformans 585-1 draft genome JXXK00000000 5397
2368 B-2932 Peptococcus simiae M108 16S rRNA gene KP322014 1488
2369 B-2935 Pseudomonas turukhanskensis IB-1.1 16S rRNA gene KP306892 1412
134 B-2935 Pseudomonas turukhanskensis IB-1.1 gyrB gene LT219440 1149
115 B-2935 Pseudomonas turukhanskensis IB-1.1 rpoB gene LT219439 1129
114 B-2935 Pseudomonas turukhanskensis IB-1.1 rpoD gene LT219438 714
2398 B-2936 Magnetospirillum caucasicum SO-1 16S rRNA gene JX502622 1440
3861 B-2936 Magnetospirillum caucasicum SO-1 draft genome AONQ00000000 4870514
2403 B-2937 Magnetospirillum aberrantis SpK 16S rRNA gene JQ673402 1473
3860 B-2937 Magnetospirillum aberrantis SpK draft genome JAAIYP000000000 4148414
2391 B-2938 Magnetospirillum meridiorum SP-1 16S rRNA gene KC252630 1443
85 B-2938 Magnetospirillum meridiorum SP-1 cbbL II gene KF787146 556
2384 B-2939 Magnetospirillum moscoviense BB-1 16S rRNA gene KF712468 1445
84 B-2939 Magnetospirillum moscoviense BB-1 cbbL II gene KF712469 761
2366 B-2940 Cuniculiplasma divulgatum PM4 16S rRNA gene KT005320 1469
2365 B-2941 Cuniculiplasma divulgatum S5 16S rRNA gene KT005321 1469
284 B-2945 Methylocapsa palsarum NE2 draft genome FOSN00000000 4105299
341 B-2946 Thermogladius calderae 1633 complete genome CP003531 1356318
2602 B-2948 Sporosalibacterium tautonense MRo-4 16S rRNA gene KX371568 1520
2360 B-2949 Tepidibacillus infernus MBL-TLP 16S rRNA gene KU726543 1412
2362 B-2960 Dissulfurirhabdus thermomarina SH388 16S rRNA gene KU051627 1521
2355 B-2961 Thermodesulfitimonas autotrophica SF97 16S rRNA gene KX450231 1427
2364 B-2962 Inmirania thermothiophila S2479 16S rRNA gene KT159732 1513
378 B-2964 Tenuifilum thalassicum 38H-str complete genome CP041345 3195778
2297 B-3021 Desulfosporosinus metallidurans OL 16S rRNA gene MT359230 1452
362 B-3021 Desulfosporosinus metallidurans OL draft genome MLBF00000000 5292883
2282 B-3023 Acetobacterium woodii DSM 1030T 16S rRNA gene X96954 1475
878 B-3027 Ferrovum myxofaciens P3G 16S rRNA gene HM044161 1372
83 B-3027 Ferrovum myxofaciens P3G cbbL gene HQ322122 619
151 B-3027 Ferrovum myxofaciens P3G nifH gene HQ322123 386
2356 B-3037 Methylobacillus methanolivorans Z 16S 16S rRNA gene KX057479 1443
2434 B-3039 Delftia sp. Lp-1 16S rRNA gene GQ994938 1457
2603 B-3042 Proteinivorax hydrogeniformans Z-710 16S rRNA gene KU933341 1485
2361 B-3043 Thermodesulfobium acidiphilum 3127-1 16S rRNA gene KU664659 1544
2335 B-3044 Tundrisphaera lichenicola P12 16S rRNA gene KX943553 1420
785 B-3045 Fimbriiglobus ruber VKM B-3045 16S rRNA gene KX369544 1390
280 B-3045 Fimbriiglobus ruber SP5 draft genome NIDE00000000 12363577
340 B-3049 Desulfovibrio sp. TomC draft genome JSEH00000000 5308211
336 B-3066 Thermodesulfovibrio sp. N1 draft genome MAVV00000000 1915222
2433 B-3132 Geobacillus proteiniphilus 1017 16S rRNA gene GU459251 1494
2334 B-3134 Natronospirillum operosum G-116 16S rRNA gene KY056621 1499
2333 B-3145 Ancylobacter sonchi Osot 16S rRNA gene KY492736 1392
163 B-3145 Ancylobacter sonchi Osot mxaF gene KY496776 505
337 B-3146 Desulfosporosinus sp. I2 draft genome JYNH00000000 5311733
338 B-3147 Desulfosporosinus sp. OT draft genome AGAF00000000 5702338
2331 B-3158 Methylobacillus caricis OV 16S rRNA gene KY806199 1413
161 B-3158 Methylobacillus caricis OV mxaF gene KY807769 543
2332 B-3159 Methylophilus aquaticus LTK 16S rRNA gene KY806198 1423
162 B-3159 Methylophilus aquaticus LTK mxaF gene KY807768 482
2316 B-3165 Staphylococcus cohnii KL-T 16S rRNA gene MF059099 1487
2330 B-3177 Thermosulfurimonas marina SU872 16S rRNA gene KY953157 1537
2600 B-3183 Desulfothermobacter acidiphilus 3408-1 16S rRNA gene KY465722 1537
3902 B-3185 Acinetobacter lwoffii ED23-35 plasmid CP032115 5596
3896 B-3185 Acinetobacter lwoffii ED23-35 plasmid CP082146 4135
3901 B-3185 Acinetobacter lwoffii ED23-35 plasmid CP032114 6711
120 B-3185 Acinetobacter lwoffii ED23-35 plasmid AJ251272 9435
108 B-3185 Acinetobacter lwoffii ED23-35 plasmid CP082145 16067
3903 B-3185 Acinetobacter lwoffii ED23-35 plasmid CP082144 287861
3900 B-3185 Acinetobacter lwoffii ED23-35 plasmid CP032112 47739
3893 B-3185 Acinetobacter lwoffii ED23-35 plasmid CP032113 14118
3904 B-3185 Acinetobacter lwoffii ED23-35 plasmid CP032116 4861
3899 B-3186 Acinetobacter lwoffii ED45-23 plasmid CP032117 43270
3882 B-3186 Acinetobacter lwoffii ED45-23 plasmid CP032119 10584
3895 B-3186 Acinetobacter lwoffii ED45-23 plasmid CP032121 9201
3905 B-3186 Acinetobacter lwoffii ED45-23 plasmid CP032122 8816
3892 B-3186 Acinetobacter lwoffii ED45-23 plasmid CP032118 22769
3898 B-3186 Acinetobacter lwoffii ED45-23 plasmid CP032124 6308
106 B-3186 Acinetobacter lwoffii ED45-23 plasmid KX426229 190039
3894 B-3186 Acinetobacter lwoffii ED45-23 plasmid CP032120 11092
3897 B-3186 Acinetobacter lwoffii ED45-23 plasmid CP032123 8120
388 B-3187 Acinetobacter johnsonii ED45-25 plasmid AJ459234 8561
3890 B-3189 Acinetobacter lwoffii ED9-5a chromosome CP083571 3231133
3889 B-3189 Acinetobacter lwoffii ED9-5a plasmid CP032288 8055
105 B-3189 Acinetobacter lwoffii ED9-5a plasmid CP083572 138030
104 B-3189 Acinetobacter lwoffii ED9-5a plasmid CP083573 16567
3888 B-3189 Acinetobacter lwoffii ED9-5a plasmid CP032289 12408
3834 B-3189 Acinetobacter lwoffii ED9-5a plasmid CP032290 185756
3833 B-3189 Acinetobacter lwoffii ED9-5a plasmid CP032287 15656
3832 B-3189 Acinetobacter lwoffii ED9-5a plasmid CP083574 9958
3867 B-3192 Acinetobacter lwoffii VS15 chromosome CP080576 3260140
3886 B-3192 Acinetobacter lwoffii VS15 plasmid CP080579 10985
3885 B-3192 Acinetobacter lwoffii VS15 plasmid CP080580 11964
3884 B-3192 Acinetobacter lwoffii VS15 plasmid CP080581 4677
101 B-3192 Acinetobacter lwoffii VS15 plasmid CP080577 134096
3887 B-3192 Acinetobacter lwoffii VS15 plasmid CP080578 15780
3879 B-3193 Acinetobacter lwoffii EK30A chromosome CP080636 3187966
3824 B-3193 Acinetobacter lwoffii EK30A plasmid CP032109 6691
103 B-3193 Acinetobacter lwoffii EK30A plasmid KX528688 37500
102 B-3193 Acinetobacter lwoffii EK30A plasmid CP080639 8227
3818 B-3193 Acinetobacter lwoffii EK30A plasmid CP032103 9238
3819 B-3193 Acinetobacter lwoffii EK30A plasmid CP032111 5223
3802 B-3193 Acinetobacter lwoffii EK30A plasmid CP080637 8910
3821 B-3193 Acinetobacter lwoffii EK30A plasmid CP032105 12284
3801 B-3193 Acinetobacter lwoffii EK30A plasmid CP032110 5324
3826 B-3193 Acinetobacter lwoffii EK30A plasmid CP032108 6886
3817 B-3193 Acinetobacter lwoffii EK30A plasmid CP032104 8399
3883 B-3193 Acinetobacter lwoffii EK30A plasmid CP080641 4760
3820 B-3193 Acinetobacter lwoffii EK30A plasmid CP080642 4677
3827 B-3193 Acinetobacter lwoffii EK30A plasmid CP080640 11382
3828 B-3193 Acinetobacter lwoffii EK30A plasmid CP080638 4181
3822 B-3193 Acinetobacter lwoffii EK30A plasmid CP032102 209982
3823 B-3193 Acinetobacter lwoffii EK30A plasmid CP032107 8635
3880 B-3193 Acinetobacter lwoffii EK30A plasmid CP080643 2621
3825 B-3193 Acinetobacter lwoffii EK30A plasmid CP032106 10347
109 B-3195 Acinetobacter johnsonii LS47-1 plasmid LN873255 4136
190 B-3202 Acinetobacter sp. KHP18 plasmid AF213017 6838
189 B-3203 Acinetobacter halotolerans KHW14 plasmid AJ251306 451
188 B-3203 Acinetobacter halotolerans KHW14 plasmid AJ251307 11191
306 B-3207 Megasphaera sp. ASD88 draft genome NQXW000000000 2589137
2314 B-3220 Shewanella xiamenensis DCB2-1 16S rRNA gene MG051295 558
2313 B-3221 Roseomonas aestuarii JR1/69-1-13 16S rRNA gene MG205609 1443
2312 B-3222 Pollutimonas nitritireducens JR1/69-2-13 16S rRNA gene MG205613 1524
2311 B-3223 Pollutimonas subterraneus JR1/69-3-13 16S rRNA gene MG205614 1526
2306 B-3225 Acidisarcina polymorpha SBC82 16S rRNA gene MH396772 1421
2484 B-3233 Azospirillum palustre B2 16S rRNA gene DQ787330 1395
335 B-3241 Trichococcus shcherbakoviae VKM B-3241 draft genome VENO00000000 3134598
2310 B-3242 Megasphaera sp. ASD97 16S rRNA gene MG321613 1370
2294 B-3243 Faecalicatena fissicatena DSM 3598T 16S rRNA gene NR_117142 1523
267 B-3243 Faecalicatena fissicatena JCM 31501 hsp60 gene LC192836 552
2370 B-3258 Desulfosporosinus sp. BG 16S rRNA gene KP184717 1440
2273 B-3260 Trichococcus shcherbakoviae ART1 16S rRNA gene LS451231 1496
358 B-3260 Trichococcus shcherbakoviae Trichococcus ART11 draft genome UNRR00000000 3137223
2607 B-3261 Isachenkonia alkalipeptolytica Z-1701 16S rRNA gene MN994853 1508
3815 B-3266 Oceanispirochaeta crateris K2 16S rRNA gene KC261847 1469
3829 B-3266 Oceanispirochaeta crateris K2 complete genome CP036150 4012482
2604 B-3267 Celerinatantimonas diazotrophica S-G2-2 16S rRNA gene DQ913890 1493
153 B-3267 Celerinatantimonas diazotrophica S-G2-2 nifH gene DQ913885 417
2265 B-3268 Hydrogeniiclostidium mannosilyticum ASD2818 16S rRNA gene MH043116 1536
357 B-3268 Hydrogeniiclostidium mannosilyticum ASD2818 draft genome QLYR00000000 3014016
2599 B-3269 Sphaerochaeta halotolerans 4-11 16S rRNA gene MH456879 1543
2305 B-3270 Magnetospirillum kuznetsovii LBB-42 16S rRNA gene MH571849 1494
2308 B-3277 Lichenibacterium minor KCTC 72077 16S rRNA gene MG996731 1418
2299 B-3280 Ancylobacter lacus F30L 16S rRNA gene MK931436 1383
2315 B-3301 Prosthecochloris marina V1 16S rRNA gene MF423475 1349
364 B-3301 Prosthecochloris marina V1 draft genome PDNZ00000000 2718726
2298 B-3305 Lichenicoccus roseus KEBCLARHB70R 16S rRNA gene MK966397 1446
363 B-3305 Lichenicoccus roseus KEBCLARHB70R draft genome VCDI00000000 4788108
2300 B-3306 Alkalicaulis satelles G-192 16S rRNA gene MK578529 1417
315 B-3335 Lacipirellula parvula PX69 complete genome AP021861 6922258
3813 B-3375 Biomaibacter acetigenes SP2 16S rRNA gene MN996834 1537
3812 B-3376 Infirmifilum lucidum 3507LT complete genome CP062310 1625846
2274 B-3378 Sulfurimonas crateris SN118 16S rRNA gene MK859925 1466
359 B-3378 Sulfurimonas crateris SN118 draft genome SZPX00000000 3428
97 B-3379 Psychrobacter maritimus MR29-12 plasmid HF953351 14835
3811 B-3387 Alkalibaculum sporogenes M08 DMB 16S rRNA gene MK779772 1481
3810 B-3387 Alkalibaculum sporogenes M08 DMB draft genome WHNX00000000 350599
3809 B-3388 Calorimonas adulescens A05 MB 16S rRNA gene MK787307 1460
3808 B-3388 Calorimonas adulescens A05MB draft genome VTPS00000000 259595
2301 B-3390 Psychrobacter sp. ZMg10 16S rRNA gene MK135922 1373
2302 B-3391 Psychrobacter sp. GPg3 16S rRNA gene MK135920 934
2303 B-3392 Psychrobacter sp. BMg1 16S rRNA gene MK135919 1397
2266 B-3393 Sphaerochaeta halotolerans 585 16S rRNA gene MH456878 1448
3807 B-3405 Pseudosulfovibrio alkaliphilus F-1 16S rRNA gene MN601397 1540
3806 B-3405 Pseudosulfovibrio alkaliphilus F-1 draft genome WODC00000000 322715
3805 B-3406 Anaerotalea alkaliphila F-3ap 16S rRNA gene MN617093 1517
3804 B-3406 Anaerotalea alkaliphila F-3ap draft genome JAAEEH000000000 298004
3803 B-3407 Pelovirga terrestris M08fum 16S rRNA gene MN022555 1500
3843 B-3407 Pelovirga terrestris M08fum draft genome JACWUN000000000 309667
304 B-3416 Pectobacterium versatile F135 draft genome PDVX00000000 4891073
300 B-3417 Pectobacterium aquaticum F164 draft genome PJJA00000000 446167
3857 B-3418 Pectobacterium versatile F131 draft genome PDVW00000000 4839711
305 B-3419 Pectobacterium versatile F018 draft genome PDVV00000000 4911663
302 B-3420 Pectobacterium polaris F109 draft genome RRYS00000000 4858646
3856 B-3423 Pectobacterium parmentieri PB20 complete genome CP065036 4847736
303 B-3424 Pectobacterium brasiliense F152 draft genome PJDM00000000 4765091
3855 B-3425 Pectobacterium brasiliense F126 complete genome CP065031 5052362
301 B-3453 Xanthobacter oligotrophicus 29k draft genome VTTL00000000 5313236
2613 B-3454 Azospirillum sp. Sh1 16S rRNA gene MK804688 1404
356 B-3454 Azospirillum sp. Sh1 draft genome VTTK00000000 7274202
313 B-3467 Frigoriglobus tundricola PL17 complete genome CP053452 9832702
2275 B-3473 Desulfonatronum lacustre Z-7951 16S rRNA gene Y14594 1363
782 B-3496 Diplocloster agilis ASD3451 16S rRNA gene MK615130 1530
277 B-3496 Diplocloster agilis ASD3451 draft genome JAHQCY000000000 5864356
784 B-3497 Diplocloster agilis ASD5720 16S rRNA gene MT908949 1530
279 B-3497 Diplocloster agilis ASD5720 draft genome JAHQCW000000000 5719309
783 B-3498 Diplocloster modestus ASD4241 16S rRNA gene MT908948 1532
278 B-3498 Diplocloster modestus ASD4241 draft genome JAHQCX000000000 5576960
3854 B-3509 Fervidicoccus fontis 3639Fd draft genome JADEZV000000000 1284168
3853 B-3511 Pelosinus baikalensis Bkl1 16S rRNA gene MW805760 840
3845 B-3511 Pelosinus baikalensis Bkl1 draft genome JAJHJB000000000 5323910
3850 B-3519 Methanosarcina soligelidi SMA-21 16S rRNA gene JF812255 1337
3849 B-3519 Methanosarcina soligelidi SMA-21 draft genome JQLR00000000 4064496
2264 B-3533 Ancylobacter oerskovii DSM 18746T 16S rRNA gene AM778407 1459
2260 B-3541 Gemmata palustris G18 16S rRNA gene MW542577 1400
312 B-3544 Thiothrix subterranea Ku-5 complete genome CP053482 4036668
311 B-3545 Thiothrix litoralis AS complete genome CP072801 4284843
3846 B-3576 Prosthecodimorpha staleyi 22 16S rRNA gene MZ836486 1436
308 B-3576 Prosthecodimorpha staleyi 22 draft genome JAHHZF000000000 6192307
2258 B-3578 Photocaulis sulfatitolerans BL14 16S rRNA gene MW970396 1320
2259 B-3579 Photocaulis rubescens ML37 16S rRNA gene MW970386 1380
3878 B-3664 Cytobacillus pseudoceanisediminis BNO1 chromosome CP097349 5347902
3839 B-3664 Cytobacillus pseudoceanisediminis BNO1 plasmid CP097350 342541
*Comment: The “Sequenced culture” column indicates the collection number of the actually sequenced culture, and the “VKM culture” column indicates the corresponding collection number in VKM.

Updated 06/11/2023