VKM genetic data with Yeasts sequences
ID | VKM culture* | Genus | Species | Sequenced culture* | Seq_type | GenBank No | bp | ||
483 | Y-1532 | Curvibasidium | cygneicollum | CBS 4551 | 26S rRNA gene | AF189928 | 618 | ||
484 | Y-1628 | Papiliotrema | laurentii | VKM Y-1628 | 26S rRNA gene | FN689394 | 1071 | ||
485 | Y-1665 | Papiliotrema | laurentii | VKM Y-1665 | 26S rRNA gene | FN689393 | 1071 | ||
497 | Y-2284 | Curvibasidium | pallidicorallinum | CBS 9091 | 26S rRNA gene | AF444736 | 618 | ||
482 | Y-2428 | Mrakia | aquatica | VKM Y-2428 | 26S rRNA gene | AY526216 | 649 | ||
496 | Y-2905 | Papiliotrema | perniciosus | VKM Y-2905 | 26S rRNA gene | AF472624 | 597 | ||
495 | Y-2906 | Papiliotrema | nemorosus | VKM Y-2906 | 26S rRNA gene | AF472625 | 597 | ||
492 | Y-2918 | Filobasidium | stepposum | VKM Y-2918 | 26S rRNA gene | DQ222456 | 585 | ||
494 | Y-2923 | Saitozyma | paraflava | VKM Y-2923 | 26S rRNA gene | AY395799 | 594 | ||
493 | Y-2939 | Piskurozyma | silvicola | PTZ 82 (ex-type) | 26S rRNA gene | AY898955 | 600 | ||
564 | Y-2954 | Piskurozyma | filicata | 18S rRNA gene and ITS1 | EU433965 | 274 | |||
487 | Y-2954 | Piskurozyma | filicata | VKM Y-2954 | 26S rRNA gene | EU433983 | 618 | ||
563 | Y-2955 | Piskurozyma | filicata | 18S rRNA gene and ITS1 | EU433966 | 200 | |||
486 | Y-2955 | Piskurozyma | filicata | VKM Y-2955 | 26S rRNA gene | EU433984 | 620 | ||
491 | Y-2958 | Kwoniella | pini | VKM Y-2958 | 26S rRNA gene | EF672245 | 643 | ||
489 | Y-2962 | Yamadamyces | rosulatus | CBS10977 | 26S rRNA gene | EU872490 | 570 | ||
434 | Y-2962 | Yamadamyces | rosulatus | cDNA 5' similar to Rubisco (RbcS), mRNA sequence | 872492 | 245 | |||
501 | Y-2964 | Oberwinklerozyma | straminea | CBS10976 | 18S rRNA gene, ITS1, 5.8S rRNA gene, and ITS2, and 28S rRNA gene | EU872491 | 544 | ||
490 | Y-2964 | Oberwinklerozyma | straminea | CBS10976 | 26S rRNA gene | EU872489 | 530 | ||
488 | Y-2971 | Oberwinklerozyma | silvestris | CBS 11420 | 26S rRNA gene | GQ121044 | 506 | ||
261 | Y-2971 | Oberwinklerozyma | silvestris | CBS 11420 | ITS1, 5.8S rRNA gene, and ITS2 | GQ121045 | 556 | ||
223 | Y-3058 | Cyberlindnera | dauci | KBP Y-6686 | ITS1, 5.8S rRNA gene and ITS2, and large subunit ribosomal RNA gene | MT636878 | 1116 | ||
68 | Y-3058 | Cyberlindnera | dauci | KBP Y-6686 | small subunit ribosomal RNA gene | MT636884 | 1667 | ||
453 | Y-3060 | Zygotorulaspora | dagestanica | KBP Y-4591 | AK-2020a strain KBP:Y-4591 small subunit ribosomal RNA gene, ITS1, 5.8S rRNA gene, and ITS2, and large subunit ribosomal RNA gene | MW036827 | 3173 | ||
433 | Y-3060 | Zygotorulaspora | dagestanica | KBP Y-4591 | CE41 partial RPB1 gene for RNA polymerase II large subunit 1 | LR884243 | 670 | ||
432 | Y-3060 | Zygotorulaspora | dagestanica | KBP Y-4591 | CE41 partial RPB2 gene for RNA polymerase II large subunit 2 | LR884244 | 1027 | ||
431 | Y-3060 | Zygotorulaspora | dagestanica | KBP Y-4591 | CE41 partial tef1a gene for translation elongation factor 1 alpha | LR884242 | 445 | ||
222 | Y-3061 | Papiliotrema | horticola | KBP Y-6685 | ITS1, 5.8S rRNA gene and ITS2, and large subunit ribosomal RNA gene | MW579431 | 1371 | ||
117 | Y-3061 | Papiliotrema | horticola | KBP Y-6685 | partial RPB1 gene for RNA polymerase II large subunit 1 | LR814015 | 705 | ||
116 | Y-3061 | Papiliotrema | horticola | KBP Y-6685 | partial RPB2 gene for RNA polymerase II large subunit 2 | HG993247 | 822 | ||
111 | Y-3061 | Papiliotrema | horticola | KBP Y-6685 | partial tef1a gene for translation elongation factor 1 alpha | LR814014 | 523 | ||
67 | Y-3061 | Papiliotrema | horticola | KBP Y-6685 | small subunit ribosomal RNA gene | MT636882 | 1664 | ||
224 | Y-3062 | Teunia | lichenophila | KBP Y-6495 | ITS1, 5.8S rRNA gene and ITS2, and large subunit ribosomal RNA gene | MN128421 | 1069 | ||
91 | Y-3062 | Teunia | lichenophila | KBP Y-6495 | QMW-2020a partial RPB1 gene for RNA polymerase II large subunit 1 | HG992858 | 782 | ||
90 | Y-3062 | Teunia | lichenophila | KBP Y-6495 | QMW-2020a partial tef1a gene for translation elongation factor 1 alpha | HG992859 | 470 | ||
69 | Y-3062 | Teunia | lichenophila | KBP Y-6495 | small subunit ribosomal RNA gene | MW599986 | 1675 | ||
221 | Y-3063 | Metschnikowia | taurica | KBP Y-6723 | ITS1, 5.8S rRNA gene and ITS2, and large subunit ribosomal RNA gene | MW579432 | 421 | ||
171 | Y-3063 | Metschnikowia | taurica | KBP Y-6723 | large subunit ribosomal RNA gene | MW580940 | 512 | ||
110 | Y-3063 | Metschnikowia | taurica | KBP Y-6723 | partial tef1a gene for translation elongation factor 1 alpha | HG992856 | 923 | ||
182 | Y-3079 | Saccharomyces | cerevisiae | KBP Y-4511 | large subunit ribosomal RNA gene | MF927655 | 605 | ||
175 | Y-3098 | Metschnikowia | colchici | KBP Y-4604 | large subunit ribosomal RNA gene | MH844415 | 498 | ||
145 | Y-3103 | Spencermartinsiella | europaea | KBP 3878 | 26S rRNA gene | FN659776 | 628 | ||
276 | Y-3107 | Candida | sphagnicola | CBS 11774 | genomic DNA containing 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2, 28S rRNA gene | FN868154 | 1154 | ||
146 | Y-3117 | Cystobasidium | psychroaquaticum | CBS 11769 = DSM 27713 = MUCL 52875 | 18S rRNA gene | LM644062 | 1628 | ||
275 | Y-3117 | Cystobasidium | psychroaquaticum | CBS11769 | genomic DNA containing 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2, 28S rRNA gene | FN868153 | 1173 | ||
112 | Y-3117 | Cystobasidium | psychroaquaticum | CBS 11769 = DSM 27713 = MUCL 52875 | partial tef1a gene for translation elongation factor 1 alpha | LM644068 | 984 | ||
202 | Y-3132 | Saccharomyces | cerevisiae | KBP Y-4748 | ITS2 and large subunit ribosomal RNA gene | MF927657 | 746 | ||
197 | Y-3150 | Hanseniaspora | thailandica | KBP Y-4868 | ITS2 and large subunit ribosomal RNA gene | MG367285 | 611 | ||
195 | Y-3152 | Nakazawaea | siamensis | KBP Y-4875 | ITS2 and large subunit ribosomal RNA gene | MG367290 | 677 | ||
201 | Y-3153 | Wickerhamiella | azyma | KBP Y-4876 | ITS2 and large subunit ribosomal RNA gene | MG367274 | 664 | ||
198 | Y-3154 | Debaryomyces | nepalensis | KBP Y-4877 | ITS2 and large subunit ribosomal RNA gene | MG367284 | 707 | ||
200 | Y-3159 | Candida | jaroonii | KBP Y-4889 | ITS2 and large subunit ribosomal RNA gene | MG367277 | 701 | ||
204 | Y-3161 | Candida | heveicola | KBP Y-4891 | ITS2 and large subunit ribosomal RNA gene | MF927603 | 641 | ||
194 | Y-3163 | Tremella | fuciformis | KBP Y-4896 | ITS2 and large subunit ribosomal RNA gene | MG367299 | 653 | ||
199 | Y-3164 | Candida | phyllophila | KBP Y-4897 | ITS2 and large subunit ribosomal RNA gene | MG367278 | 567 | ||
468 | Y-3183 | Clavispora | fructus | KBP Y-4967 | 5.8S rRNA gene, ITS2, and large subunit ribosomal RNA gene | MG367275 | 767 | ||
193 | Y-3184 | Wickerhamomyces | mucosus | KBP Y-4968 | ITS2 and large subunit ribosomal RNA gene | MG367300 | 698 | ||
183 | Y-3188 | Naganishia | vishniacii | KBP Y-5000 | large subunit ribosomal RNA gene | MF927624 | 575 | ||
181 | Y-3189 | Saccharomyces | cerevisiae | KBP Y-5009 | large subunit ribosomal RNA gene | MF927656 | 536 | ||
179 | Y-3279 | Kwoniella | bestiolae | KBP Y-5507 | large subunit ribosomal RNA gene | MG367324 | 529 | ||
178 | Y-3281 | Candida | dendronema | KBP Y-5511 | large subunit ribosomal RNA gene | MG367326 | 548 | ||
229 | Y-3291 | Taphrina | carpini | KBP Y-5582 | ITS1, 5.8S rRNA gene and ITS2, and large subunit ribosomal RNA gene | MF927666 | 578 | ||
*Comment: The "Sequenced culture" column indicates the collection number of the actually sequenced culture, and the "VKM culture" column indicates the corresponding collection number in VKM. |
Updated 07/11/2023